24.4 Viral Infections of the Gastrointestinal Tract

3 min readjune 18, 2024

Viral gastrointestinal infections can wreak havoc on your digestive system. From to , these pesky pathogens spread through contaminated food, water, and close contact. They target the cells lining your gut, causing symptoms like and .

viruses are another group of troublemakers that affect your liver. There are five main types (A, B, C, D, E), each with its own transmission routes and potential for long-term damage. Diagnosis involves stool or blood tests, while treatment focuses on managing symptoms and, in some cases, using antiviral medications.

Viral Gastrointestinal Infections

Transmission of gastrointestinal viruses

Top images from around the web for Transmission of gastrointestinal viruses
Top images from around the web for Transmission of gastrointestinal viruses
    • Spreads through the fecal-oral route when infected fecal particles enter the mouth
    • Can be transmitted through close contact with infected individuals (daycare centers, nursing homes)
    • Virus survives on contaminated surfaces, objects, or in food and water leading to infection when ingested
    • in stool can continue for days after symptoms resolve, prolonging the risk of transmission
  • Norovirus
    • Highly contagious and spreads easily through the fecal-oral route
    • Commonly transmitted by consuming contaminated food (leafy greens, shellfish) or water
    • Spreads rapidly in close quarters through contact with infected individuals (cruise ships, schools)
    • Tiny infectious particles can become aerosolized when an infected person vomits, leading to transmission through inhalation

Hepatitis virus types and effects

  • ()
    • Primarily spreads through the fecal-oral route or by eating contaminated food (raw shellfish) or drinking contaminated water
    • Causes acute liver inflammation that is usually self-limiting and resolves without chronic infection
  • ()
    • Transmitted through exposure to infected blood (sharing needles), sexual contact, or from mother to child during birth
    • Can cause acute or chronic liver inflammation potentially leading to and liver cancer
  • ()
    • Spreads through direct contact with infected blood (intravenous drug use, inadequately sterilized medical equipment)
    • Sexual transmission is possible but less common compared to HBV
    • Chronic HCV infection often progresses to cirrhosis and increases the risk of liver cancer
  • ()
    • Can only infect individuals who are already infected with HBV as it requires HBV for replication
    • Transmitted through the same routes as HBV (blood and sexual contact)
    • Co-infection with HDV worsens the severity of liver disease and accelerates the progression to cirrhosis
  • ()
    • Spreads via the fecal-oral route, mainly through drinking contaminated water in developing countries
    • Can be acquired by eating undercooked meat from infected animals (pork, wild boar), indicating potential for
    • Usually causes acute, self-limiting illness but can lead to severe disease in pregnant women

Viral structure and host interaction

  • protects the genetic material and aids in host cell entry
  • Viruses target and infect enterocytes, the cells lining the intestinal tract
  • individuals are at higher risk for severe and prolonged infections

Diagnosis of viral gastrointestinal infections

  • Diagnostic techniques
    • Analyzing stool samples to detect viral antigens or genetic material using
    • Blood tests to identify antibodies (IgM for acute infection, IgG for past exposure) or viral antigens
    • Assessing liver function through blood tests measuring enzymes , , and levels
    • Performing a liver biopsy to determine the severity and stage of infection
  • Treatment options
    • Providing supportive care to manage symptoms
      1. Administering oral or intravenous rehydration therapy to replace fluids and electrolytes lost through diarrhea and vomiting
      2. Recommending rest and medications to relieve symptoms (anti-emetics for vomiting, antidiarrheals for diarrhea)
    • Using antiviral therapy for specific hepatitis infections
      • and combination therapy for chronic hepatitis C infection
      • Nucleoside/nucleotide analogues like or to suppress HBV replication in chronic hepatitis B
    • Performing liver transplantation as a last resort for end-stage liver disease caused by chronic hepatitis B or C
  • Implementing prevention and control measures
    • Vaccinating against hepatitis A and B to prevent infection
    • Screening donated blood products for hepatitis B and C to reduce transfusion-related transmission
    • Improving public health through better sanitation and access to safe drinking water

Key Terms to Review (73)

Adefovir: Adefovir is an antiviral medication used to treat hepatitis B virus (HBV) infections. It inhibits viral DNA polymerase, preventing viral replication.
Adenovirus: Adenoviruses are a group of non-enveloped, double-stranded DNA viruses that can infect a variety of host cells, including those in the human gastrointestinal tract. These viruses are known for their ability to cause a range of illnesses, from common colds to more severe respiratory and gastrointestinal diseases.
Alanine aminotransferase: Alanine aminotransferase (ALT) is an enzyme primarily found in the liver that helps convert alanine into pyruvate, a key molecule in metabolism. Elevated ALT levels can indicate liver damage or inflammation.
Albert Kapikian: Albert Kapikian was a prominent American virologist who made significant contributions to the understanding of viral infections of the gastrointestinal tract. His pioneering work on the identification and characterization of various enteric viruses has had a lasting impact on the field of gastroenterology.
Alkaline phosphatase: Alkaline phosphatase is an enzyme found in various tissues throughout the body, including the liver and bones. It plays a crucial role in breaking down proteins and is often used as a marker in diagnosing liver and bone diseases.
ALT: ALT, or alanine aminotransferase, is an enzyme found primarily in the liver that is often used as a biomarker to detect and monitor liver damage or disease. It plays a crucial role in the context of viral infections of the gastrointestinal tract, as elevated ALT levels can be indicative of viral hepatitis or other liver-related complications associated with these types of infections.
Aspartate aminotransferase: Aspartate aminotransferase (AST) is an enzyme found in various tissues, including the liver, heart, and muscles. It plays a crucial role in amino acid metabolism by transferring amino groups from aspartate to alpha-ketoglutarate.
AST: AST, or Aspartate Aminotransferase, is an enzyme found in various tissues throughout the body, particularly in the liver and heart. It plays a crucial role in the metabolism and function of these organs, and its levels can be used as an indicator of certain medical conditions, especially those related to viral infections of the gastrointestinal tract.
Astroviridae: Astroviridae is a family of non-enveloped, positive-sense, single-stranded RNA viruses known to cause gastroenteritis in humans and animals. They are primarily transmitted through the fecal-oral route and are a common cause of viral diarrhea.
Astrovirus: Astroviruses are a group of small, non-enveloped, positive-sense, single-stranded RNA viruses that primarily cause viral gastroenteritis in humans and animals. They are named for their distinctive star-shaped appearance under electron microscopy.
Astroviruses: Astroviruses are a group of RNA viruses that primarily cause gastroenteritis, particularly in young children and the elderly. They are a common cause of diarrhea and vomiting globally.
Bilirubin: Bilirubin is a yellow compound formed during the breakdown of red blood cells and is processed by the liver for excretion. Elevated levels can indicate liver dysfunction or bile duct obstruction.
Bilirubin: Bilirubin is a yellow-orange pigment that is a byproduct of the normal breakdown of red blood cells. It is an important compound in the context of viral infections of the gastrointestinal tract, as it can provide insights into the functioning of the liver and the progression of certain viral diseases.
Caliciviruses: Caliciviruses are a family of single-stranded RNA viruses known for causing gastrointestinal infections in humans and animals. They are primarily responsible for outbreaks of viral gastroenteritis, particularly in settings such as cruise ships and nursing homes.
Campylobacter jejuni gastroenteritis: Campylobacter jejuni gastroenteritis is an infection of the gastrointestinal tract caused by the bacterium Campylobacter jejuni. It commonly results in symptoms such as diarrhea, abdominal pain, fever, and nausea.
Cirrhosis: Cirrhosis is a chronic liver disease characterized by the replacement of normal liver tissue with non-functioning scar tissue. This condition can lead to a variety of complications and is often associated with inflammation and viral infections of the gastrointestinal tract.
Claudin: Claudins are a family of tight junction proteins that play a crucial role in regulating the permeability and integrity of epithelial and endothelial cell barriers, including those found in the gastrointestinal tract. They are essential components in maintaining the selective barrier function of these cellular junctions.
Cytomegalovirus: Cytomegalovirus (CMV) is a common herpesvirus that can cause asymptomatic infections or severe disease in immunocompromised individuals. It particularly affects the gastrointestinal tract and can complicate organ transplants.
Diarrhea: Diarrhea is a common gastrointestinal condition characterized by frequent, loose, and watery bowel movements. It is often associated with viral infections of the gastrointestinal tract, which can disrupt the normal functioning of the digestive system.
Entecavir: Entecavir is an antiviral medication used to treat chronic hepatitis B virus (HBV) infection. It works by inhibiting the replication of the virus, thereby reducing viral load in the liver.
Entecavir: Entecavir is a potent and selective guanosine analogue that inhibits hepatitis B virus (HBV) replication by interfering with the viral DNA polymerase. It is a highly effective antiviral medication used to treat chronic hepatitis B infections.
Enterocyte: Enterocytes are the absorptive epithelial cells that line the small intestine and are responsible for the absorption of nutrients from the digested food into the bloodstream. These specialized cells play a crucial role in the functioning of the gastrointestinal tract.
Epstein-Barr virus: Epstein-Barr virus (EBV) is a herpesvirus that primarily infects B cells and epithelial cells, causing mononucleosis. It is associated with several cancers, including Burkitt's lymphoma and nasopharyngeal carcinoma.
Fecal-Oral Transmission: Fecal-oral transmission refers to the spread of infectious agents, such as bacteria, viruses, and parasites, from the feces of an infected individual to the oral cavity of another person. This mode of transmission is a common route for the spread of gastrointestinal infections.
Fulminant hepatitis: Fulminant hepatitis is a severe and sudden liver failure caused by rapid liver cell death, often due to viral infections like hepatitis B or C. It leads to coagulopathy, encephalopathy, and can be life-threatening.
Gastroenteritis: Gastroenteritis is a condition characterized by inflammation of the gastrointestinal tract, typically resulting in symptoms such as diarrhea, vomiting, abdominal pain, and nausea. It can be caused by a variety of bacterial or viral pathogens that infect the digestive system.
HAV: HAV, or Hepatitis A Virus, is a highly contagious virus that causes liver inflammation and affects the gastrointestinal tract. It is primarily transmitted through ingestion of contaminated food or water.
HBV: Hepatitis B Virus (HBV) is a DNA virus that primarily infects the liver, causing both acute and chronic infections. It is transmitted through contact with infectious body fluids, leading to inflammation and potential damage to the liver.
HCV: HCV, or Hepatitis C Virus, is a bloodborne virus that primarily affects the liver but can also impact digestive health. Transmission usually occurs through contact with infected blood.
HDV: HDV, or Hepatitis D Virus, is a defective virus that requires the presence of Hepatitis B Virus (HBV) to replicate. It primarily affects the liver and can exacerbate HBV infections.
Hepatitis: Hepatitis is an inflammation of the liver often caused by viral infections. It can lead to liver damage, cirrhosis, or liver cancer.
Hepatitis: Hepatitis is a general term that refers to inflammation of the liver, often caused by viral infections. It can lead to a range of liver-related complications and is an important topic in the context of viral infections of the gastrointestinal tract and circulatory/lymphatic systems.
Hepatitis A Virus: The hepatitis A virus is a single-stranded RNA virus that primarily infects the liver and causes acute viral hepatitis, a contagious liver disease. It is a member of the Picornaviridae family and is a significant cause of viral infections in the gastrointestinal tract.
Hepatitis B Virus: The hepatitis B virus (HBV) is a highly contagious DNA virus that primarily infects the liver, causing inflammation and potential long-term liver damage. It is a significant global health concern, as chronic HBV infection can lead to cirrhosis and liver cancer if left untreated.
Hepatitis C Virus: The Hepatitis C virus (HCV) is a small, enveloped, positive-sense, single-stranded RNA virus that primarily infects and replicates in the liver, leading to the development of hepatitis C, a serious liver disease. HCV is a major cause of viral hepatitis and a leading global health concern.
Hepatitis D virus: The hepatitis D virus (HDV) is a unique, subviral agent that requires the hepatitis B virus (HBV) for its replication and propagation. It is a small, circular, single-stranded RNA virus that can only infect individuals who are already infected with HBV, leading to a more severe form of viral hepatitis known as hepatitis D.
Hepatitis E virus: The Hepatitis E virus (HEV) is a non-enveloped, single-stranded RNA virus that primarily causes acute viral hepatitis, an inflammation of the liver. It is a significant public health concern, especially in developing countries with poor sanitation and contaminated water supplies.
Hepatitisviruses: Hepatitis viruses are a group of viruses that primarily cause inflammation of the liver. They can significantly impact the digestive system and overall health.
Hepatocytes: Hepatocytes are the main functional cells of the liver, responsible for a wide range of metabolic, detoxification, and synthetic activities. They play a crucial role in maintaining homeostasis and are a primary target during viral infections affecting the liver.
HEV: Hepatitis E virus (HEV) is a non-enveloped, single-stranded RNA virus that primarily causes liver inflammation. It is transmitted through the fecal-oral route and is often associated with waterborne outbreaks.
Immunocompromised: Immunocompromised refers to a weakened or impaired immune system, which reduces the body's ability to fight off infections and diseases. This condition can make individuals more susceptible to viral, fungal, and parasitic infections, including those that affect the gastrointestinal tract and nervous system.
Inactivated Vaccine: An inactivated vaccine is a type of vaccine that contains killed or inactivated virus or bacteria, which can no longer cause disease but still stimulate the immune system to produce antibodies and provide protection against the corresponding infectious agent.
Incubation period: The incubation period is the time interval between exposure to a pathogen and the appearance of the first symptoms. It is a critical phase in understanding disease transmission and prevention.
Incubation Period: The incubation period refers to the time between when an individual is exposed to an infectious agent and when they begin to show symptoms of the resulting disease. This period is crucial in understanding the progression and transmission of infectious diseases across various contexts.
Interferon: Interferons are a group of signaling proteins made and released by host cells in response to the presence of several pathogens, such as viruses, bacteria, and parasites. They allow for communication between cells to trigger the protective defenses of the immune system that eradicate pathogens.
Interferon alpha 2b: Interferon alpha 2b is a cytokine used as an antiviral agent and immunotherapy, particularly effective against viral infections. It works by enhancing the immune response and inhibiting viral replication.
JAM-A: JAM-A, or Junctional Adhesion Molecule-A, is a cell surface protein that plays a crucial role in the regulation of tight junctions between epithelial and endothelial cells. It is an important component in maintaining the integrity of the gastrointestinal tract's barrier function, which is essential for preventing the entry of pathogens and toxins into the body.
Jaundice: Jaundice is a medical condition characterized by the yellowing of the skin and eyes due to elevated bilirubin levels in the blood. It often indicates underlying issues with the liver, bile ducts, or red blood cells.
Lamivudine: Lamivudine is an antiviral medication used to treat infections caused by hepatitis B virus (HBV) and human immunodeficiency virus (HIV). It works by inhibiting the reverse transcriptase enzyme, essential for viral replication.
Live Attenuated Vaccine: A live attenuated vaccine is a type of vaccine that contains a weakened or attenuated form of a pathogen, which can still induce an immune response without causing the full-blown disease. These vaccines are designed to mimic natural infection and provide long-lasting immunity against the target pathogen.
Necrosis: Necrosis is the premature death of cells in living tissue caused by external factors such as infection, toxins, or trauma. It leads to the unregulated digestion of cell components, often resulting in inflammation.
Norovirus: Norovirus is a highly contagious virus that causes acute gastroenteritis, characterized by symptoms such as nausea, vomiting, diarrhea, and abdominal pain. It is a leading cause of viral foodborne illness and is often referred to as the 'stomach flu,' though it is not related to the influenza virus.
Noroviruses: Noroviruses are highly contagious viruses that cause acute gastroenteritis, leading to inflammation of the stomach and intestines. They are a leading cause of foodborne illness globally.
Norwalk viruses: Norwalk viruses, also known as noroviruses, are a group of highly contagious viruses that cause gastroenteritis, leading to inflammation of the stomach and intestines. They are a common cause of foodborne illness outbreaks.
Oseltamivir: Oseltamivir is an antiviral medication used to treat and prevent influenza A and B. It works by inhibiting the neuraminidase enzyme, which is essential for viral replication.
Oseltamivir: Oseltamivir is an antiviral medication used to treat and prevent influenza (flu) infections. It works by inhibiting the activity of the neuraminidase enzyme, which is essential for the release and spread of influenza viruses within the body, thereby reducing the duration and severity of flu symptoms.
PCR (Polymerase Chain Reaction): PCR, or Polymerase Chain Reaction, is a powerful molecular biology technique used to amplify specific DNA sequences exponentially. It is a fundamental tool employed across various fields, including microbiology, genetics, forensics, and diagnostics, to study and detect the presence of genetic material from a wide range of organisms, including prokaryotes, viruses, fungi, and protozoa.
Reoviridae: Reoviridae is a family of non-enveloped, double-stranded RNA viruses known to infect the gastrointestinal and respiratory tracts. These viruses are responsible for diseases like rotavirus gastroenteritis, which primarily affects infants and young children.
Ribavirin: Ribavirin is a synthetic guanosine analogue that inhibits the replication of various RNA and DNA viruses. It is a broad-spectrum antiviral medication used in the treatment of viral infections, particularly those affecting the gastrointestinal tract.
RNA-dependent RNA polymerase: RNA-dependent RNA polymerase (RdRp) is an enzyme that catalyzes the synthesis of RNA from an RNA template. It is a critical component in the replication and transcription of viral genomes, particularly for RNA viruses, as it allows them to replicate their genetic material within the host cell.
Rotavirus: Rotavirus is a highly contagious virus that causes severe diarrhea, primarily in infants and young children. It is a leading cause of gastroenteritis worldwide.
Rotavirus: Rotavirus is a genus of double-stranded RNA viruses that are a leading cause of severe gastroenteritis in infants and young children worldwide. These viruses primarily infect the gastrointestinal tract and are responsible for a significant portion of viral infections affecting the digestive system.
RT-PCR: RT-PCR, or reverse transcription-polymerase chain reaction, is a powerful molecular technique used to detect and quantify specific RNA sequences, including those from viruses. It is a crucial tool for the diagnosis and monitoring of viral infections, including those affecting the gastrointestinal tract.
Sofosbuvir: Sofosbuvir is an antiviral medication used primarily to treat hepatitis C virus (HCV) infections. It functions as a nucleotide analog inhibitor of the HCV RNA polymerase.
Telbivudine: Telbivudine is an antiviral medication used to treat chronic hepatitis B virus (HBV) infections. It works by inhibiting viral DNA synthesis.
Tenofovir: Tenofovir is a nucleotide reverse transcriptase inhibitor (NtRTI) used in the treatment and prevention of viral infections, particularly HIV and hepatitis B. It works by interfering with the reverse transcription process, which is crucial for the replication of these viruses within host cells.
Villi: Villi are small, finger-like projections lining the interior of the small intestine that increase surface area for nutrient absorption. Each villus contains blood vessels and a lymphatic vessel to transport absorbed nutrients.
Viral Capsid: A viral capsid is the protein shell that surrounds and protects the genetic material of a virus. It is the outermost layer of a virus particle, responsible for recognizing and binding to host cells during the viral infection process.
Viral Shedding: Viral shedding refers to the release and dissemination of virus particles from an infected host. It is a critical process in the viral life cycle and the transmission of viral infections, particularly in the context of gastrointestinal viral infections.
Vomiting: Vomiting is the forceful expulsion of stomach contents through the mouth, often accompanied by nausea. It is a common symptom associated with various viral infections of the gastrointestinal tract, as it serves as a protective mechanism to expel harmful substances from the body.
VP4: VP4 is a structural protein found in the capsid of picornaviruses, a family of non-enveloped, positive-sense, single-stranded RNA viruses that commonly infect the gastrointestinal tract. It is one of the four major viral capsid proteins that make up the icosahedral viral shell and plays a crucial role in viral entry and host cell recognition.
Yellow fever: Yellow fever is a viral hemorrhagic disease transmitted by infected mosquitoes, primarily Aedes aegypti. It causes symptoms ranging from fever to severe liver disease and jaundice.
Zoonotic Transmission: Zoonotic transmission refers to the process by which infectious diseases are transmitted from animals to humans. This term is particularly relevant in the context of various microbiology topics, as it highlights the importance of understanding the complex interplay between different species and the potential for disease spread across the animal-human interface.
© 2024 Fiveable Inc. All rights reserved.
AP® and SAT® are trademarks registered by the College Board, which is not affiliated with, and does not endorse this website.