15.3 Quasi-Likelihood Estimation

4 min readjuly 30, 2024

is a powerful tool for handling overdispersed data in linear modeling. It extends the likelihood function to accommodate situations where the 's variance exceeds what's expected under standard probability distributions.

This method relaxes the need for fully specifying the response variable's distribution, offering more flexibility than traditional approaches. It's particularly useful when dealing with count data or other scenarios where the true underlying distribution is unknown or hard to pin down.

Quasi-likelihood for Overdispersion

Introduction to Quasi-likelihood

  • extends the likelihood function to model overdispersed data where the response variable's variance exceeds the nominal variance assumed by the model
  • arises when the observed data variance surpasses expectations under the assumed probability distribution, violating the equal mean and variance assumption in standard generalized linear models (GLMs) ()
  • Quasi-likelihood estimation relaxes the need to fully specify the response variable's probability distribution, offering more flexibility in handling overdispersion compared to traditional likelihood-based methods (maximum likelihood estimation)

Construction and Properties of Quasi-likelihood

  • The quasi-likelihood function is constructed using only the response variable's mean and variance functions, without requiring a complete specification of the probability distribution
  • Quasi-likelihood estimation yields consistent and asymptotically normal parameter estimates, even with overdispersion, providing a robust alternative to maximum likelihood estimation
  • The quasi-likelihood approach is particularly useful when the true underlying distribution is unknown or difficult to specify correctly (count data with extra-Poisson variation)
  • Quasi-likelihood allows for the modeling of a wider range of data types and distributions compared to standard GLMs, which are limited to the exponential family of distributions (binomial, Poisson, gamma)

Estimating Parameters with Quasi-likelihood

Specification of Mean and Variance Functions

  • Quasi-likelihood estimation involves specifying the response variable's mean and variance functions, which relate to the linear predictor through a and a , respectively
  • The link function describes the relationship between the mean of the response variable and the linear predictor, while the variance function characterizes the relationship between the mean and variance of the response variable (log link for count data, logit link for binary data)
  • Common variance functions include the constant variance function for normal data, the for Poisson data, and the mean-squared function for gamma data

Quasi-likelihood Estimating Equations and Optimization

  • The quasi-likelihood estimating equations are derived by setting the (the derivative of the quasi-likelihood with respect to the parameters) equal to zero
  • The quasi-score function is the product of the inverse of the variance function and the difference between the observed and expected response variable values
  • The quasi-likelihood estimating equations are solved iteratively using numerical optimization techniques, such as the Newton-Raphson algorithm or the Fisher scoring method, to obtain the quasi-likelihood estimates of the model parameters
  • The , which quantifies the overdispersion degree, is estimated separately from the regression parameters, often using the method of moments or the -based approach (ratio of the deviance to the degrees of freedom)

Interpreting Quasi-likelihood Results

Parameter Estimates and Inference

  • Quasi-likelihood estimates of the regression parameters have similar interpretations to those obtained from standard GLMs, representing the change in the response variable associated with a unit change in the predictor variable, holding other predictors constant
  • The estimated dispersion parameter provides information about the overdispersion extent in the data, with values greater than 1 indicating the presence of overdispersion
  • Confidence intervals and hypothesis tests for the quasi-likelihood estimates can be constructed using robust standard errors, which account for the increased variability due to overdispersion (sandwich estimators)
  • The quasi-likelihood ratio test can be used to compare nested models and assess the significance of predictor variables, considering the overdispersion in the data

Goodness-of-fit and Model Evaluation

  • Goodness-of-fit measures, such as the deviance and the , can be used to evaluate the quasi-likelihood model's adequacy in capturing the observed variability in the data
  • The deviance is the difference in the log quasi-likelihoods between the fitted model and a saturated model, while the Pearson chi-square statistic compares the observed and expected response values
  • Residual plots, such as the standardized Pearson residuals against the fitted values or the predictor variables, can help assess the model's fit and identify potential outliers or influential observations
  • Model selection techniques, such as the (QAIC) or the (QBIC), can be employed to compare and select among different quasi-likelihood models

Robustness and Efficiency of Quasi-likelihood Estimates

Robustness to Model Misspecification

  • Quasi-likelihood estimates are robust to misspecification of the probability distribution, as they only require the correct specification of the mean and variance functions
  • The and asymptotic normality of quasi-likelihood estimates hold under mild regularity conditions, ensuring their validity in large samples
  • Quasi-likelihood estimation provides protection against model misspecification, particularly when the true underlying distribution is unknown or difficult to specify correctly (zero-inflated or hurdle models for count data)

Efficiency and Finite-sample Performance

  • The of quasi-likelihood estimates, relative to the maximum likelihood estimates, depends on the overdispersion extent and the correctness of the specified variance function
  • In the presence of mild overdispersion, quasi-likelihood estimates are nearly as efficient as maximum likelihood estimates, while in cases of severe overdispersion, quasi-likelihood estimates may be more efficient
  • Simulation studies can be conducted to assess the finite-sample performance of quasi-likelihood estimates under various scenarios of overdispersion and model misspecification (varying sample sizes, overdispersion levels, and link functions)
  • Sensitivity analyses can be performed to evaluate the robustness of quasi-likelihood estimates to departures from the assumed mean and variance functions, as well as to the presence of outliers or influential observations

Key Terms to Review (28)

AIC: Akaike Information Criterion (AIC) is a statistical measure used to compare the goodness of fit of different models while penalizing for the number of parameters included. It helps in model selection by providing a balance between model complexity and fit, where lower AIC values indicate a better model fit, accounting for potential overfitting.
BIC: The Bayesian Information Criterion (BIC) is a criterion for model selection among a finite set of models, based on the likelihood of the data and the number of parameters in the model. It helps to balance model fit with complexity, where lower BIC values indicate a better model, making it useful in comparing different statistical models, particularly in regression and generalized linear models.
Binomial Regression: Binomial regression is a type of statistical analysis used when the outcome variable is binary, meaning it has two possible outcomes, often coded as 0 and 1. This method is particularly useful for modeling relationships between a binary response variable and one or more predictor variables, allowing for the assessment of how predictors influence the likelihood of an event occurring. It also incorporates quasi-likelihood estimation to provide robust parameter estimates when data may not meet strict distributional assumptions.
Consistency: Consistency in statistical estimators refers to the property that as the sample size increases, the estimator converges in probability to the true parameter value. This means that with more data, our estimates become more accurate and reliable, which is crucial for validating the results of statistical analyses and models.
Deviance: Deviance refers to the difference between observed values and expected values within a statistical model, often used to measure how well a model fits the data. It plays a key role in assessing model performance and is connected to likelihood functions and goodness-of-fit measures, which help in determining how accurately the model represents the underlying data-generating process.
Dispersion parameter: The dispersion parameter is a key statistical concept that quantifies the variability or spread of data points in a statistical model. It helps in understanding how much the observed data varies from the expected values predicted by a model, providing insight into the accuracy of predictions and the reliability of estimates. This parameter is particularly relevant in various modeling techniques, including those utilizing link functions and quasi-likelihood estimation.
Efficiency: Efficiency refers to the property of an estimator that measures how well it utilizes information from the data to produce accurate parameter estimates with minimal variance. In the context of statistical methods, an efficient estimator is one that achieves the lowest possible variance among all unbiased estimators for a given sample size. This concept connects deeply with both quasi-likelihood estimation and least squares estimation using matrices, as both methods aim to produce reliable estimates with optimal use of available data.
Generalized Estimating Equations: Generalized estimating equations (GEE) are a statistical method used for estimating the parameters of a generalized linear model with possible correlation between outcomes. This approach provides a way to analyze correlated data, such as repeated measures or clustered data, while addressing issues of non-independence among observations. GEEs are particularly useful for handling situations where traditional maximum likelihood estimation may be inadequate due to the complexities of the data structure.
John Nelder: John Nelder is a prominent statistician known for his significant contributions to the field of statistics, particularly in the development of the Generalized Linear Models (GLMs) framework. His work on quasi-likelihood estimation has played a crucial role in extending the applicability of statistical models to a wider range of data types, especially those with non-normal distributions.
Link function: A link function is a mathematical function that connects the linear predictor of a generalized linear model (GLM) to the expected value of the response variable. This function allows for the transformation of the predicted values so they can be modeled appropriately, particularly when dealing with non-normal distributions. It plays a critical role in determining how different types of response variables, such as binary or count data, are represented in the model, influencing aspects like model diagnostics and goodness-of-fit assessments.
Mean Function: The mean function is a crucial statistical concept that represents the expected value of a random variable, providing insight into the central tendency of a probability distribution. It plays a vital role in various modeling approaches, particularly in understanding how the average outcome can be predicted based on different parameters or predictors. In quasi-likelihood estimation, the mean function helps in defining the relationship between the response variable and the predictors while accounting for the distributional properties of the data.
Mixed effects models: Mixed effects models are statistical models that incorporate both fixed effects, which are constant across individuals or groups, and random effects, which account for variations among individuals or groups. These models are especially useful for analyzing data that has multiple levels of variability, allowing researchers to understand both the overall trends and individual differences within the data.
Model fit statistics: Model fit statistics are quantitative measures used to assess how well a statistical model represents the observed data. These statistics help researchers determine the adequacy of the model in explaining variability in the data and can guide improvements to the model or inform decisions about which model to use. They play a critical role in evaluating the performance and reliability of models, especially in the context of quasi-likelihood estimation, where accurate fitting is essential for valid conclusions.
Overdispersion: Overdispersion occurs when the observed variance in data is greater than what the statistical model predicts, particularly in count data where Poisson regression is often used. This can signal that the model is not adequately capturing the underlying variability, leading to potential issues in inference and prediction. Recognizing overdispersion is crucial for choosing appropriate models and ensuring accurate results in statistical analyses.
Pearson Chi-Square Statistic: The Pearson Chi-Square Statistic is a measure used to assess how expectations compare to actual observed data in categorical variables. It helps determine if there are significant differences between expected frequencies and observed frequencies in a contingency table, aiding in the evaluation of independence between variables.
Peter McCullagh: Peter McCullagh is a prominent statistician known for his significant contributions to the fields of statistical theory and applied statistics, particularly in the development of quasi-likelihood methods. His work has greatly influenced the way statisticians approach the modeling of data, especially when dealing with non-normal distributions and varying dispersion in the context of quasi-likelihood estimation.
Poisson Regression: Poisson regression is a type of generalized linear model (GLM) used for modeling count data, where the response variable represents the number of times an event occurs within a fixed interval of time or space. It assumes that the counts follow a Poisson distribution, making it particularly suitable for situations with non-negative integer outcomes. The model helps in understanding how various factors influence the rate of occurrence of events and connects to diagnostics, estimation methods, and specific applications in data analysis.
Quasi-akaike information criterion: The quasi-akaike information criterion (QAIC) is a statistical tool used for model selection, particularly when dealing with models based on quasi-likelihood estimation. It provides a way to compare different models by balancing their goodness of fit against their complexity, helping to identify the model that best explains the data without overfitting.
Quasi-Bayesian Information Criterion: The Quasi-Bayesian Information Criterion (QBIC) is a statistical measure used for model selection that extends the traditional Bayesian Information Criterion (BIC) by incorporating quasi-likelihood methods. It is particularly useful in situations where the likelihood is difficult to specify or not available, allowing for more flexible modeling while still providing a penalization for complexity. QBIC is valuable in assessing the fit of models while balancing goodness of fit and simplicity, promoting better predictive performance.
Quasi-likelihood: Quasi-likelihood is a method used in statistical modeling that extends the traditional likelihood framework to handle situations where the assumptions of standard likelihood models may not hold. It allows for more flexible modeling of data, especially when there is overdispersion or other complexities that cannot be adequately addressed by standard generalized linear models (GLMs). This concept is particularly useful for assessing goodness-of-fit and estimating parameters when the data exhibit behaviors that deviate from classical assumptions.
Quasi-likelihood estimation: Quasi-likelihood estimation is a statistical method used to estimate parameters in models that may not adhere strictly to the assumptions of traditional likelihood approaches. This technique is particularly useful when dealing with non-normal response distributions or when the likelihood function is complex or unknown. Quasi-likelihood allows for more flexible modeling, facilitating the analysis of data that may violate standard assumptions.
Quasi-likelihood ratio tests: Quasi-likelihood ratio tests are statistical methods used to compare the goodness of fit between two models when the response variable follows a distribution that is not fully specified. These tests extend the traditional likelihood ratio test by allowing for situations where the full likelihood function is difficult or impossible to specify, providing a more flexible framework for hypothesis testing. They are particularly useful in generalized linear models and robust regression analysis, accommodating various data types and distributions.
Quasi-score function: A quasi-score function is a tool used in statistics that helps to estimate parameters of a statistical model when the likelihood function is not fully specified. It provides a way to derive estimates by utilizing an adjusted version of the score function, which is the gradient of the log-likelihood. Quasi-score functions are particularly important in quasi-likelihood estimation, allowing for robust parameter estimation even when the model does not fit perfectly.
Residual Analysis: Residual analysis is a statistical technique used to assess the differences between observed values and the values predicted by a model. It helps in identifying patterns in the residuals, which can indicate whether the model is appropriate for the data or if adjustments are needed to improve accuracy.
Response Variable: A response variable, also known as a dependent variable, is the outcome or effect that researchers aim to predict or explain in a study. It is influenced by one or more explanatory variables and plays a crucial role in various statistical models, serving as the focal point for prediction, estimation, and hypothesis testing.
Robust regression: Robust regression is a type of regression analysis designed to be less sensitive to outliers and violations of assumptions compared to traditional methods like ordinary least squares (OLS). It provides a more reliable estimate of the relationship between variables when data contains anomalies or deviations from standard assumptions. This technique is particularly useful in situations where the data may not meet the strict criteria required for classical regression analysis.
Variance Function: The variance function describes how the variance of a response variable changes with respect to the mean in a statistical model. It's crucial in understanding the relationship between the mean and the dispersion of data, especially when dealing with non-constant variance, known as heteroscedasticity. This concept is closely tied to link functions and linear predictors, which help relate the mean of the response variable to the predictors, and plays a significant role in quasi-likelihood estimation methods that address situations where the likelihood cannot be directly applied due to these variances.
Working correlation structure: A working correlation structure refers to a specified correlation pattern among the observations in a statistical model, particularly in the context of generalized estimating equations (GEE). This structure is important because it helps to account for the correlation between repeated measures or clustered data, allowing for more accurate estimation of model parameters and their standard errors.
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